Publications
2021-
Mette Galsgaard Malle, Philipp M. G. Löffler, Søren S.-R. Bohr, Magnus Berg Sletfjerding, Nikolaj Alexander Risgaard, Simon Bo Jensen, Min Zhang, Per Hedegaard, Stefan Vogel*, Nikos S. Hatzakis*, Single particle combinatorial multiplexed liposome fusion mediated by DNA, Nature Chemistry, 2021, accepted
2019-2020
Arias-Alpizar, G., Kong, L., Vlieg, R. C., Rabe, A., Papadopoulou, P., Meijer, M. S., Bonnet, S., Vogel, S. Noort, J. van, Kros A. and Campbell, F.*, Light-triggered switching of liposome surface charge directs delivery of membrane impermeable payloads in vivo, Nat. Comm. 2020, (11), 3638.
Löffler, P. M. G., Rabe, A. and Vogel, S.*, Lipid-modified peptide nucleic acids – synthesis and application to programmable liposome fusion., Meth. Mol. Bio., 2020, Ed. Nielsen, P. E. Springer, New York, NY, (2105), 75-96.
Löffler, P. M. G., Ries, O. and Vogel, S*, DNA-mediated liposome fusion observed by fluorescence spectrometry., Meth. Mol. Bio., 2020, Ed. Ashtakova, I. K., Springer, New York, NY, (2063), 101-118.
Thomsen, R. P., Malle M. G., Okholm, A. H., Krishnan S., Nielsen S. S.-R., Sørensen R. S., Ries, O., Vogel, S., Simmel F., Hatzakis N. S.*, Kjems J*, A large size-selective DNA nanopore with sensing applications, Nat. Comm. 2019, (10), 5655.
Löffler, P. M. G., Hansen, A. H., Ries, O., Jakobsen, U., Rabe, A., Sørensen, K. T., Glud, K. and Vogel, S.*, Lipidated Polyaza Crown Ethers as Membrane Anchors for DNA-Controlled Content Mixing Between Liposomes. Scientific Reports 2019, 13856
2017-2018
A. Ferino, G. Miglietta, R. Picco, S. Vogel, J. Wengel and L. E. Xodo, MicroRNA Therapeutics: Design of single-stranded miR-216b mimics to target KRAS in pancreatic cancer cells. RNA Biology, 2018 15:10, 1273-1285.
P. M. G. Löffler, O. Ries, A. Rabe, A. H. Okholm, R. P. Thomsen, J. Kjems and S. Vogel, A DNA-programmed liposome fusion cascade. Angew. Chem. Int. Ed. 2017, 56, 13228-13231.
O. Ries, P. M. G. Löffler, A. Rabe, J. J. Malavan and S. Vogel, Efficient liposome fusion mediated by lipid–nucleic acid conjugates. Org. Biomol. Chem. 2017, 15, 8936–8945.
A. Rabe, P. M. G. Löffler, O. Ries and S. Vogel, Programmable fusion of liposomes mediated by lipidated PNA. Chem. Commun. 2017, 53, 11921–11924.
2015-2016
S. Cogoi, U. Jakobsen, E. B. Pedersen, S. Vogel & L. E. Xodo, Lipid-modified G4-decoy oligonucleotide anchored to nanoparticles: delivery and bioactivity in pancreatic cancer cells Sci. Rep. 2016, 6, 1-13.
U. Jakobsen and S. Vogel, Mismatch discrimination of lipidated DNA and LNA-probes (LiNAs) in hybridization-controlled liposome assembly, Org. Biomol. Chem., 2016, 6985-6995.
O. Ries and S. Vogel, Aptamer–Liposome Conjugates: Current Art and Future Prospects, Aptamers, Ed. R. N. Veedu, John Pan Stanford Publishing Pte. Ltd., 2016, 223-240.
O. Ries, P. M. G. Löffler, S. Vogel, Convenient synthesis and application of versatile nucleic acid lipid membrane anchors in the assembly and fusion of liposomes, Org. Biomol. Chem., 2015, 9673-9680.
S. Vogel, DNA‐Controlled Assembly of Soft Nanoparticles, DNA in Supramolecular Chemistry and Nanotechnology, Ed. E. Stulz & G. H. Clever, John Wiley & Sons, Ltd., Chichester 2015, 397-409.
2013-2014
S. Vogel, O. Ries, U. Jakobsen, J. Schytte, Lipid membrane anchors, 2014, DK-PA201470516.
U. Jakobsen and S. Vogel, Assembly of Liposomes controlled by Triple Helix formation, Bioconj. Chem. 2013, 24, 1485-1495.
B. B. Olsen, H. Thisgaard, S. Vogel, M. Thomassen, T. A. Kruse, D. Needham, J. Mollenhauer and P. F. Høilund-Carlsen, Novel radioisotope-based nanomedical approaches, Eur. J. Nanomed., 2013, 5(4), 181-193.
T. E. Rasmussen, L. Jauffred, J. Brewer, S. Vogel, E. R. Torbensen, C. Lagerholm, L. Oddershede and E. C. Arnspang, Single molecule applications of quantum dots. J. Mod. Physics, 2013, 4, 27-42.
2011-2012
J. T. Madsen, S. Vogel, J. Duus; K. E. Andersen, Encapsulating contact allergens in liposomes, ethosomes, and polycaprolactone may affect their sensitizing properties. Cutaneous and Ocular Toxicology, 2011, 30(2), 116-123.
J. T. Madsen, S. Vogel, J. D. Johansen, K. E. Andersen, J. A. Sørensen, J. B. Nielsen, Percutaneous penetration characteristics and release kinetics of contact allergens encapsulated in ethosomes. Cutaneous and Ocular Toxicology, 2011, 30(1), 38-44.
2006-2010
J. T. Madsen, S. Vogel, K. E. Andersen, Formulation of contact allergens in ethosomes may increase their sensitizing capacity, Dermatitis, 2010, 21, 227-228.
J. T. Madsen, S. Vogel, A.-T. Karlberg, C. Simonsson, J. D. Johansen, K. E. Andersen, Encapsulating contact allergens in liposomes, ethosomes and polycaprolactone may affect their sensitizing properties, Contact Dermatitis. 2010, 63(4), 209-14.
U. Jakobsen, S. A. Shelke, S. Vogel, S. Th. Sigurdsson, Site-Directed Spin-Labeling of Nucleic Acids by Click Chemistry: Detection of Abasic Sites in Duplex DNA by EPR Spectroscopy, J. Am. Chem. Soc. 2010, 132, 10424-10428.*
J. T. Madsen, S. Vogel, A.-T. Karlberg, C. Simonsson, J. D. Johansen, K. E. Andersen, Ethosome Formulations of Known Contact Allergens can Increase their Sensitizing Capacity, Acta. Derm. Venereol., 2010, 90, 374-378.
U. Jakobsen and S. Vogel, DNA-Controlled Assembly of Liposomes in Diagnostics, Methods in Enzymology, Vol. 464, 2009, 233-248.
A. C. Simonsen, Stefan Vogel, DNA mediated assembly of lipid membranes, patent, 2008, WO 2008/089771 A1.
U. Jakobsen, A. C. Simonsen, Stefan Vogel, DNA-Controlled Assembly of Soft Nanoparticles, J. Am. Chem. Soc. 2008, 130, 10462-10463
U. Jakobsen, Stefan Vogel, Lipophilic DNA-conjugates: DNA controlled assembly of liposomes, Nucleosides, Nucleotides & Nucleic Acids, 2008, 52(1), 223-224.
U. Jakobsen, Adam C. Simonsen, Stefan Vogel, DNA-Controlled Assembly of Soft Nanoparticles, Nucleosides, Nucleotides & Nucleic Acids, 2008, 52(1), 225-226.
S. Vogel, DNA controlled assembly of Liposomes, Nucleosides, Nucleotides & Nucleic Acids, 2008, 52(1), 21-22.
A. C. Simonsen, S. Vogel, DNA mediated assembly of lipid particles and uses therefor, patent, 2007, DK200700110.
U. Jacobsen, K. Rohr, S. Vogel, Towards a catalytic site in DNA: Polyaza crown ether as building blocks in DNA-conjugates. Nucleosides, Nucleotides & Nucleic Acids, 2007, 26, 1419-1422.
U. Jakobsen, R. K. Madsen, S. Vogel, Polyaza crown ether as non-nucleosidic building blocks in DNA-conjugates: Synthesis and remarkable stabilization of dsDNA. Nucleosides, Nucleotides & Nucleic Acids, 2007, 26, 1221-1224.
C. Verhagen, T. Bryld, M. Raunkjær, S. Vogel, J. Wengel, Synthesis of conformationally locked methylamino-C-nucleosides for use as a conjugation point and the evaluation of N-(pyren-1-ylcarbonyl)-methylamino-C-nucleosides, Eur. J. Org. Chem., 2006, 2538-2548.
K. Rohr, S. Vogel, Polyaza crown ether as non-nucleosidic building blocks in DNA-conjugates: Synthesis and remarkable stabilization of dsDNA, Chembiochem, 2006, 7, 463-467.
G. Gaubert, R. B. Babu, S. Vogel, T. Bryld, B. Vester, J. Wengel, L-Ribo and -D-lyxo-configured oligonucleotides: Synthesis and RNA-selective hybridization Tetrahedron, 2006, 62, 2278-2294.
G. Gaubert, R. B. Babu, S. Vogel, T. Bryld, B. Vester, J. Wengel, L-Ribo and -D-lyxo-configured oligonucleotides: Tetrahedron, 2006, 62, 2278-2294.
2000-2005
S. Vogel, K. Rohr, O. Dahl, J. Wengel, A substituted triaza crown ether as a binding site in DNA conjugates Chem. Commun., 2003, (8), 1006-1007.
H. Betat, S. Vogel, M. Struhalla, H.-H. Foerster, M. Famulok, P. Welzel, U. Hahn, Aptamers that recognize the lipid moiety of the antibiotic Moenomycin A. J. Biol. Chem., 2003, 384(10/11), 1497-1500.
S. Vogel, K. Rohr., O. Dahl, J. Wengel, Synthesis of an asymmetric substituted aza crown ether as metal- and amino acid binding site in DNA-conjugates. Nucleosides, Nucleotides & Nucleic Acids, 2003, 22(5-8), 1039-1040.
K. Stembera, S. Vogel, A. Buchynskyy, J. A. Ayala, P. Welzel, A surface plasmon resonance analysis of the interaction between the antibiotic moenomycin A and penicillin-binding protein 1b. ChemBioChem, 2002, 3, 559-565.
A. Buchynskyy, U. Kempin, S. Vogel, L. Hennig, M. Findeisen, D. Müller, S. Giesa, H. Knoll, P. Welzel, Synthesis of fluorescent derivatives of the antibiotic moenomycin A. Eur. J. Org. Chem., 2002, 7, 1149-1162.
A. Buchynskyy, K. Stembera, D. Knoll, S. Vogel, U. Kempin, A. Biallass, L. Hennig, M. Findeisen, D. Müller, P. Welzel, Synthesis of tools for raising antibodies against moenomycin epitopes and initial immunological studies. Tetrahedron, 2002, 58, 7741-7760.
K. Stembera, A. Buchynskyy, S. Vogel, D. Knoll, A. A. Osman, J. A. Ayala, P. Welzel, Moenomycin-mediated affinity purification of penicillin-binding protein 1b. ChemBioChem, 2002, 3, 332-340.
S. Vogel, K. Stembera, L. Hennig, M. Findeisen, S. Giesa, P. Welzel, M. Lampilas, Moenomycin analogues with modified lipid side chains from indium-mediated Barbier-type reactions. Tetrahedron, 2001, 57, 4139-4146.
S. Vogel, K. Stembera, L. Hennig, M. Findeisen, S. Giesa, P. Welzel, C. Tillier, C. Bonhomme, M. Lampilas, Moenomycin analogs with long-chain amine lipid parts from reductive amination. Tetrahedron, 2001, 57, 4147-4160.
S. Vogel, M. Lampilas Moenomycin A derivatives, their preparation, and use as antibacterial products. (Aventis AG, France.). Eur. Pat. Appl., 2001, 19 pp. EP 1 069 130 A1.
S. Vogel, A. Buchynskyy, K. Stembera, K. Richter, L. Hennig, D. Müller, P. Welzel, F. Maquin, C. Bonhomme, M. Lampilas, Some Selective Reactions of Moenomycin A. Bioorg. Med. Chem. Lett., 2000, 10, 1963-1965.